zamushwani

Query Tcga

Name: Query Tcga
Author: zamushwani

Data community

SOURCE https://github.com/zamushwani/biomedical-ai-skills/blob/main/.claude/commands/query-tcga.md

Description

--- description: Query TCGA/GDC for projects, mutations, or clinical data. Use when the user asks for TCGA cohorts, mutation counts, or clinical variables from the Genomic Data Commons. argument-hint: [project-id] [gene] allowed-tools: Read Grep Glob Bash(python3 *) Bash(curl *) --- Query the GDC for project `$0`, gene `$1`. Follow the `biomedical-mcp` skill. Call the **GDC REST API** directly (`https://api.gdc.cancer.gov`) rather than wrapping TCGAbiolinks, which is R and calls the same API u

Installation

Installs to ~/.claude/commands/zamushwani-biomedical-ai-skills-query-tcga.md

Terminal

mkdir -p ~/.claude/commands && curl -fsSL https://raw.githubusercontent.com/zamushwani/biomedical-ai-skills/HEAD/.claude/commands/query-tcga.md -o ~/.claude/commands/zamushwani-biomedical-ai-skills-query-tcga.md

Restart Claude Code, or start a new session, for it to be picked up.