Dbbs Claude Code Workshop — Development skill for Claude Code
Public datasets for the DBBS Claude Code workshop (airway RNA-seq, Moving Pictures 16S).
How to install Dbbs Claude Code Workshop
This entry records only its repository, not the path inside it, so there is no
exact command to give. Open shandley/dbbs-claude-code-workshop and copy the folder into
~/.claude/skills/, or the file into ~/.claude/agents/.
What Dbbs Claude Code Workshop does
Public datasets for the DBBS Claude Code workshop (airway RNA-seq, Moving Pictures 16S).
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README
DBBS Claude Code workshop data
Two small public datasets for the hands-on part of the DBBS Claude Code workshop at Washington University School of Medicine. Pick the one closest to your field.
| Folder | Data | Size |
|---|---|---|
airway-rnaseq/ |
Bulk RNA-seq of human airway smooth muscle cells treated with dexamethasone, albuterol, or both. 4 donors, 16 samples, gene counts. | 6 MB |
moving-pictures-16s/ |
16S rRNA amplicon data from the gut, palms and tongue of two people. 34 samples, 770 sequence variants. | 0.3 MB |
Each folder has a `README.txt` that describes every file, where it came from, and what to know before you analyze it.
Workshop pages
- Workshop guide: Claude Code features with short exercises, and the steps for the data project.
- Terminal cheat sheet: the few terminal commands you need to find a folder and start Claude Code.
- Git and GitHub cheat sheet: what git and GitHub do when Claude Code manages them, and what to ask Claude.
- Advanced module: build a data validator skill, build a skill for your computing cluster, and review the PyDESeq2 source code with Claude. The
validation-challenge/folder holds its data.
Getting the files
You need a copy of this repository on your computer. Choose one of these three ways.
Option 1: ask Claude Code to get it
Start Claude Code in your workshop folder and type:
Use git clone to copy https://github.com/shandley/dbbs-claude-code-workshop into a folder called data/raw here.Claude needs `git` for this. If `git` is missing, Claude will tell you; use Option 3 instead.
Option 2: clone it yourself
In a terminal, from your workshop folder:
git clone https://github.com/shandley/dbbs-claude-code-workshop data/rawThis creates `data/raw/` containing b
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