nygenome

Audit Vcf Schema

Name: Audit Vcf Schema
Author: nygenome

Security community

SOURCE https://github.com/nygenome/Lancet2/blob/main/.claude/commands/audit-vcf-schema.md

Description

# /audit-vcf-schema — Focused VCF FORMAT/INFO/FILTER drift check Walk every `##FORMAT`, `##INFO`, and `##FILTER` line in `src/lancet/cli/vcf_header_builder.cpp` and verify that the bundle's claims about VCF schema match. This is the focused complement to `/audit-bundle` for the case where you want to check VCF schema specifically without running the full audit. ## When to run this After every release that touches VCF emission. After any change to `vcf_header_builder.cpp`, `variant_call.{h,cpp

Installation

Installs to ~/.claude/commands/nygenome-lancet2-audit-vcf-schema.md

Terminal

mkdir -p ~/.claude/commands && curl -fsSL https://raw.githubusercontent.com/nygenome/Lancet2/HEAD/.claude/commands/audit-vcf-schema.md -o ~/.claude/commands/nygenome-lancet2-audit-vcf-schema.md

Restart Claude Code, or start a new session, for it to be picked up.