Awesome Genomic Skills

Awesome Genomic Skills [](https://awesome.re)

A curated list of skills and MCP servers for working with AI coding agents (Claude Code, GitHub Copilot, Codex, Cursor, Gemini CLI, etc.) in genomics and bioinformatics, alongside other useful repositories such as benchmarks and general AI coding skills collections.

What is a Skill and what is an MCP?

**Skill:** a Markdown file (plus optional scripts) that teaches an agent *how* to do a task — procedural know-how loaded into context on demand.

**MCP server:** a running service that gives an agent a *connection* to external systems (databases, tools, pipelines) via standardized tool calls.

Contents

• Awesome Genomic Skills
  • What is a Skill and what is an MCP?
  • Contents
  • Bioinformatics and Genomics Agent Skills
  • MCP Servers for Life Sciences
  • Benchmarks
  • General AI Coding Agent Skill Collections
  • Other Notable Awesome Lists!
  • Contributing

Bioinformatics and Genomics Agent Skills

Skill libraries and tool collections specifically targeting genomics, bioinformatics, and life sciences work with AI coding agents.

• science-skills
  • Description: Collection of ~36 agent skills spanning genomics, structural biology, cheminformatics, and literature search; wraps AlphaGenome (single-variant effect prediction), AlphaFold DB, and 30+ databases/tools (UniProt, Ensembl, gnomAD, GTEx, ClinVar, dbSNP, ChEMBL, PubChem, PDB, Foldseek, JASPAR, Reactome, STRING, Open Targets, Human Protein Atlas, PyMOL) for grounded, token-efficient scientific workflows. Apache-2.0; built for Google Antigravity but installable into any agent via `np