ammawla

Browse Files — Code Quality skill for Claude Code

Code Quality community

List, search, and inspect ENCODE files by format, type, and assembly.

How to install Browse Files

Installs to ~/.claude/skills/ammawla-encode-toolkit-browse-files/SKILL.md

Terminal
mkdir -p ~/.claude/skills/ammawla-encode-toolkit-browse-files && curl -fsSL https://raw.githubusercontent.com/ammawla/encode-toolkit/HEAD/commands/browse-files.md -o ~/.claude/skills/ammawla-encode-toolkit-browse-files/SKILL.md

Restart Claude Code, or start a new session, for it to be picked up.

What Browse Files does

name: browse-files description: List, search, and inspect ENCODE files by format, type, and assembly

Browse and inspect ENCODE files across experiments.

Use `encode_list_files` to see files within a specific experiment. Use `encode_search_files` to find file types across all experiments. Use `encode_get_file_info` for detailed metadata on a single file.

Common filters: file_format (bed, bigWig, fastq, bam), output_type (IDR thresholded peaks, signal of unique reads), assembly (GRCh38,

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Full documentation available on GitHub

View Source Repository

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